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  • Broad Institute
  • Cambridge, MA
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  1. broadinstitute/picard broadinstitute/picard Public

    A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

    Java 959 366

  2. broadinstitute/cromshell broadinstitute/cromshell Public

    CLI for interacting with Cromwell servers

    Python 53 14

  3. HumanCellAtlas/sctools HumanCellAtlas/sctools Public

    Utilities for large scale distributed single cell data processing

    Python 24 8