strange pangenome and huge graph visualization
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Updated
Jul 1, 2024 - C
strange pangenome and huge graph visualization
Panacus is a tool for computing statistics for GFA-formatted pangenome graphs
Scripts for de-novo genome assembly, assembly polishing, QC and post-assemble analyses of HiFi whole genome sequence data and downstream pangenomics analyses to identify structural variants
Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions
Library to parse, edit and handle in memory GFA graphs
Analysis of shared parts of a pangenome
maf to panache and extracting all snps and pangenome specific information.
Alignment of Pangenome Graphs with Ricci Flow
The lumpy skin disease virus (LSDV) pangenome variation graph (PVG)
Notes upon pangenome graphs construction
Repository for the FantasticLamp pipeline
Leveraging WES short reads for PAN-EXOME creation and analysis.
ODGI: understanding pangenome graphs (https://doi.org/10.1093/bioinformatics/btac308)
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