Amend bcftools conda env #37 #71
lczechAnnotations
52 warnings
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test (ubuntu-latest, pileup-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, hafpipe-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, hafpipe-4, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, hafpipe-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, hafpipe-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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envs (ubuntu-20.04, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-bcftools-4, mamba)
Mamba support is still experimental and can result in differently solved environments!
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envs (ubuntu-22.04, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-bcftools-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-bcftools-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-bcftools-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-adapterremoval-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-freebayes-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-freebayes-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-freebayes-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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example (ubuntu-20.04)
Mamba support is still experimental and can result in differently solved environments!
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example (ubuntu-22.04)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, duplicates-dedup-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-haplotypecaller-4, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, duplicates-dedup-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-haplotypecaller-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-haplotypecaller-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-seqprep-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, calling-haplotypecaller-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-seqprep-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-fastp-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwaaln-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwaaln-4, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-adapterremoval-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-fastp-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwaaln-3, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-skewer-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwaaln-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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envs (macos-12, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-adapterremoval-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-cutadapt-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-cutadapt-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-fastp-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-20.04, base)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, trimming-skewer-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bowtie2-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bowtie2-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-22.04, base)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, base, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
Mamba support is still experimental and can result in differently solved environments!
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test (ubuntu-latest, mapping-bwa-mem-1, mamba)
Mamba support is still experimental and can result in differently solved environments!
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envs (macos-11, mamba)
Mamba support is still experimental and can result in differently solved environments!
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example (macos-12)
Mamba support is still experimental and can result in differently solved environments!
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example (macos-11)
Mamba support is still experimental and can result in differently solved environments!
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test (macos-11, base)
Mamba support is still experimental and can result in differently solved environments!
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test (macos-12, base)
Mamba support is still experimental and can result in differently solved environments!
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Artifacts
Produced during runtime
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logs-example-macos-11
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1.17 MB |
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logs-example-macos-12
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1.17 MB |
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logs-example-ubuntu-20.04
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1.16 MB |
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logs-example-ubuntu-22.04
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1.17 MB |
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logs-test-macos-11-base
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1.35 MB |
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logs-test-macos-12-base
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1.35 MB |
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logs-test-ubuntu-20.04-base
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1.33 MB |
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logs-test-ubuntu-22.04-base
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1.33 MB |
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logs-test-ubuntu-latest-base
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1.33 MB |
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logs-test-ubuntu-latest-calling-bcftools-1
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291 KB |
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logs-test-ubuntu-latest-calling-bcftools-2
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286 KB |
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logs-test-ubuntu-latest-calling-bcftools-3
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347 KB |
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logs-test-ubuntu-latest-calling-bcftools-4
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322 KB |
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logs-test-ubuntu-latest-calling-freebayes-1
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1.12 MB |
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logs-test-ubuntu-latest-calling-freebayes-2
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328 KB |
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logs-test-ubuntu-latest-calling-freebayes-3
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1.11 MB |
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logs-test-ubuntu-latest-calling-haplotypecaller-1
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1.32 MB |
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logs-test-ubuntu-latest-calling-haplotypecaller-2
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1.19 MB |
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logs-test-ubuntu-latest-calling-haplotypecaller-3
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1.05 MB |
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logs-test-ubuntu-latest-calling-haplotypecaller-4
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602 KB |
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logs-test-ubuntu-latest-duplicates-dedup-1
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1.27 MB |
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logs-test-ubuntu-latest-duplicates-dedup-2
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1.27 MB |
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logs-test-ubuntu-latest-hafpipe-1
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349 KB |
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logs-test-ubuntu-latest-hafpipe-2
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250 KB |
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logs-test-ubuntu-latest-hafpipe-3
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252 KB |
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logs-test-ubuntu-latest-hafpipe-4
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243 KB |
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logs-test-ubuntu-latest-mapping-bowtie2-1
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789 KB |
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logs-test-ubuntu-latest-mapping-bowtie2-2
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825 KB |
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logs-test-ubuntu-latest-mapping-bwa-mem-1
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667 KB |
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logs-test-ubuntu-latest-mapping-bwa-mem2-1
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641 KB |
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logs-test-ubuntu-latest-mapping-bwa-mem2-2
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1.36 MB |
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logs-test-ubuntu-latest-mapping-bwaaln-1
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844 KB |
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logs-test-ubuntu-latest-mapping-bwaaln-2
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570 KB |
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logs-test-ubuntu-latest-mapping-bwaaln-3
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881 KB |
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logs-test-ubuntu-latest-mapping-bwaaln-4
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623 KB |
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logs-test-ubuntu-latest-pileup-1
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71.9 KB |
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logs-test-ubuntu-latest-trimming-adapterremoval-1
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522 KB |
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logs-test-ubuntu-latest-trimming-adapterremoval-2
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1.29 MB |
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logs-test-ubuntu-latest-trimming-adapterremoval-3
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566 KB |
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logs-test-ubuntu-latest-trimming-cutadapt-1
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1.29 MB |
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logs-test-ubuntu-latest-trimming-cutadapt-2
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2.72 MB |
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logs-test-ubuntu-latest-trimming-fastp-1
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1.87 MB |
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logs-test-ubuntu-latest-trimming-fastp-2
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556 KB |
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logs-test-ubuntu-latest-trimming-fastp-3
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565 KB |
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logs-test-ubuntu-latest-trimming-seqprep-1
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647 KB |
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logs-test-ubuntu-latest-trimming-seqprep-2
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430 KB |
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logs-test-ubuntu-latest-trimming-skewer-1
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1.58 MB |
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logs-test-ubuntu-latest-trimming-skewer-2
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1.58 MB |
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