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Add workaround for snakemake logging bug CI #91: Commit 61a291c pushed by lczech
July 17, 2024 23:24 1h 8m 27s master
master
July 17, 2024 23:24 1h 8m 27s
Release v0.13.0 CI #90: Commit 5a5bc75 pushed by lczech
July 15, 2024 22:38 1h 10m 3s master
master
July 15, 2024 22:38 1h 10m 3s
Adapt to new Snakemake profiles for slurm CI #89: Commit 6093ae9 pushed by lczech
July 15, 2024 21:08 1h 26m 6s dev
dev
July 15, 2024 21:08 1h 26m 6s
Fixes for automatic ref download CI #88: Commit 6d253c1 pushed by lczech
July 14, 2024 02:30 1h 12m 35s dev
dev
July 14, 2024 02:30 1h 12m 35s
Restructure all output files for more user convenience CI #87: Commit c079a75 pushed by lczech
July 13, 2024 17:57 1h 6m 3s dev
dev
July 13, 2024 17:57 1h 6m 3s
Fix path to envs in CI CI #86: Commit 72680b2 pushed by lczech
July 11, 2024 17:44 1h 13m 39s dev
dev
July 11, 2024 17:44 1h 13m 39s
Fix example prepare script for new directory structure CI #85: Commit 358e03a pushed by lczech
July 11, 2024 17:40 1m 18s dev
dev
July 11, 2024 17:40 1m 18s
Upgrade conda and all tools CI #84: Commit de4c8f2 pushed by lczech
July 10, 2024 23:47 1h 20m 48s dev
dev
July 10, 2024 23:47 1h 20m 48s
Debugging conda mamba env setup pt 7 CI #83: Commit 98bc6c3 pushed by lczech
July 10, 2024 18:09 1m 18s master
master
July 10, 2024 18:09 1m 18s
Debugging conda mamba env setup pt 7 CI #82: Commit 98bc6c3 pushed by lczech
July 10, 2024 18:09 1h 24m 29s dev
dev
July 10, 2024 18:09 1h 24m 29s
Try fixing mamba in CI, pt 6, back to previous test CI #81: Commit d0f7188 pushed by lczech
March 27, 2024 04:39 11m 12s master
master
March 27, 2024 04:39 11m 12s
Try fixing mamba in CI, pt 5 CI #80: Commit b7b9ba8 pushed by lczech
March 27, 2024 04:31 11m 0s master
master
March 27, 2024 04:31 11m 0s
Try fixing mamba in CI, pt 4 CI #79: Commit 4511132 pushed by lczech
March 27, 2024 04:24 11m 8s master
master
March 27, 2024 04:24 11m 8s
Try fixing mamba in CI, pt 3 CI #78: Commit bc974ea pushed by lczech
March 27, 2024 04:18 6m 33s master
master
March 27, 2024 04:18 6m 33s
Try fixing mamba in CI, pt 2 CI #77: Commit b2e5334 pushed by lczech
March 27, 2024 04:16 Startup failure master
master
March 27, 2024 04:16 Startup failure
Try fixing mambaforge miniforge mamba CI setup issue. CI #76: Commit 25288b9 pushed by lczech
March 27, 2024 03:58 10m 57s master
master
March 27, 2024 03:58 10m 57s
Refine config documentation CI #75: Commit dcbbec0 pushed by lczech
March 27, 2024 03:25 1m 0s dev
dev
March 27, 2024 03:25 1m 0s
Update fastqc to 0.12.1 to allow fixing Java OOM issue CI #74: Commit c09eb40 pushed by lczech
March 27, 2024 03:25 10m 34s master
master
March 27, 2024 03:25 10m 34s
Fix GitHub Actions Node.js deprecation CI #73: Commit ee0e323 pushed by lczech
February 29, 2024 19:13 11m 15s master
master
February 29, 2024 19:13 11m 15s
Update README.md CI #72: Commit 177efa1 pushed by lczech
February 29, 2024 19:13 1m 20s master
master
February 29, 2024 19:13 1m 20s
Amend bcftools conda env #37 CI #71: Commit c48c453 pushed by lczech
December 27, 2023 18:46 1h 11m 35s master
master
December 27, 2023 18:46 1h 11m 35s
Add Picard compatible default to bwa mem CI #70: Commit 4a41ee7 pushed by lczech
December 27, 2023 17:52 1h 4m 45s master
master
December 27, 2023 17:52 1h 4m 45s
Release v0.12.2 CI #69: Commit 1926a1f pushed by lczech
July 27, 2023 22:22 1h 48m 21s master
master
July 27, 2023 22:22 1h 48m 21s
Try fixing vcftools again, pt 2 CI #68: Commit 1601de1 pushed by lczech
July 27, 2023 21:35 1h 27m 30s dev
dev
July 27, 2023 21:35 1h 27m 30s
Try fixing vcftools again CI #67: Commit a9246cf pushed by lczech
July 27, 2023 21:33 50s dev
dev
July 27, 2023 21:33 50s